Gut microbiome sourmash compare data frame

A similarity matrix between six stool microbiome shotgun metagenome samples.

Usage

gut_compare_df

Format

## `gut_compare_df` A data frame with 6 rows and 7 columns:

sample

Sample name

SRR5935765, SRR5936131, SRR5936197, SRR5946920, SRR5946923, SRR5947006

Sequence Read Archive run accessions. Aligned values specify similarity between two samples.

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Source

<https://github.com/Arcadia-Science/sourmashconsumr/blob/main/data-raw/00_sourmash_commands.sh>